Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project

The small subunit ribosomal RNA is a useful phylogenetic marker that has been used extensively for evolutionary analyses. The RefSeq dataset contains curated 16S ribosomal RNA sequences that correspond to bacteria type materials. The RefSeq records may contain corrections to the sequence or taxonomy as compared to the original INSD submission, and may have additional information added that is not found in the original. All sequences will have the same project ID and can be found as such. Database URL: http://www.ncbi.nlm.nih.gov/bioproject/PRJNA33175.
GBIF url: https://www.gbif.org/dataset/0b0dc293-3b26-49db-b9f1-817b31ebf603
Citation: McVeigh R (2024). Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project. National Center for Biotechnology Information (NCBI). Occurrence dataset https://doi.org/10.15468/k2c8en accessed via GBIF.org on 2024-04-29.

資料集編號

0b0dc293-3b26-49db-b9f1-817b31ebf603 (DatasetUUID)

其他標題

資料集作者

Richard McVeigh

資料集發佈者

National Center for Biotechnology Information (NCBI)

來源

GBIF

來源原始網址

https://www.gbif.org/dataset/0b0dc293-3b26-49db-b9f1-817b31ebf603

資料集標籤

授權

創用CC-姓名標示

詮釋資料更新日期

2024-04-29

觀測資料最新匯入日期

2024-04-08

類群

紀錄筆數

114

下載次數

235

空間行政區時間海拔名錄資料集照片觀測紀錄表生物地圖

下載觀測紀錄

原始紀錄物種	日期	資料集
Pseudomethylobacillus aquaticus Sheu et al. 2019		Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
Streptococcus vaginalis"""" Chao et al. 2021	2019-12-20	Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
Streptococcus vulneris"""" Chung et al. 2022	2020-03-27	Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
Halopseudomonas yangmingensis"""" (Wong and Lee 2014) Girard et al. 2023		Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
Chitinilyticum litopenaei Chang et al. 2009		Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
Aeromonas taiwanensis Alperi et al. 2010		Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
Aeromonas sanarellii Alperi et al. 2010		Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
Marinobacter szutsaonensis Wang et al. 2009		Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
Filimonas effusa Chen et al. 2020		Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
Weissella muntiaci Lin et al. 2020		Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
Oleiharenicola lentus Chen et al. 2020		Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
Salinicoccus sesuvii Kämpfer et al. 2011		Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
Sphingobium fluviale Sheu et al. 2020		Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
Amniculibacterium aquaticum"""" Chen et al. 2019		Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
Luteibaculum oceani Shahina et al. 2013	2012-09-05	Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
Nocardioides echinoideorum Lin et al. 2015		Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
Novosphingobium arabidopsis Lin et al. 2014		Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
Leucobacter zeae Lai et al. 2015		Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
Leuconostoc litchii Chen et al. 2020	2015-08-03	Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
Chitinophaga taiwanensis Lin et al. 2014		Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
Chryseobacterium echinoideorum Lin et al. 2015		Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
Paenibacillus medicaginis Lai et al. 2015		Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
Companilactobacillus musae (Chen et al. 2017) Zheng et al. 2020	2016-07-08	Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
Shimia biformata Hameed et al. 2013	2012-09-05	Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project
Pseudoxanthomonas taiwanensis Chen et al. 2002		Bacterial 16S Ribosomal RNA RefSeq Targeted Loci Project